PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN33607.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 66aa    MW: 7707.11 Da    PI: 9.2617
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN33607.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.50.000147391954
                HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH 19 afeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +f eL ++l ++   +  K++Ka iL  Av+ +++L
  KHN33607.1  7 RFMELGSILDPR---KPLKMDKAVILSDAVRVVSQL 39
                789999999999...999****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.47E-7760IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.4E-8761IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 66 aa     Download sequence    Send to blast
MFYSLQRFME LGSILDPRKP LKMDKAVILS DAVRVVSQLR EEAQKLRESS ENLQEKINEL  60
KVCKLI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003547112.12e-28PREDICTED: transcription factor ILR3-like
SwissprotQ9FH371e-18ILR3_ARATH; Transcription factor ILR3
TrEMBLA0A0B2RP362e-40A0A0B2RP36_GLYSO; Transcription factor ILR3
STRINGGLYMA15G06803.17e-33(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3628722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.17e-20bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]